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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906442.1_cds_XP_016456598.1_50416
CDS Infomation

[gene=LOC107780566] [db_xref=GeneID:107780566] [protein=caffeoylshikimate esterase-like] [protein_id=XP_016456598.1] [location=join(19073..19216,20592..20621,21366..21489,21582..21728,21932..22062,22147..22284,22560..22658,24002..24217)] [gbkey=CDS]
Sequence

ATGGGAAATCAGAAGAAATTTCCAGGCATAAGTGAGGAATTGCAGAAGATATTGGATGCA
GATATGGACAACGTGGATGCCAGACGTCGTGCTAGGGAGGCATTTAAAGATATTCAGCTT
TCAATTGATCATATCTTGTTCAAGGTGCCACATGCTGGATTGAAGATGGAGGAGTCTTAT
GATGTTAATTCTGGAGGGCTGGAAATCTTCTCCAAAAGTTGGCTTCCGGAGACACGTCCC
AAAGCTGTTGTCTACTTTTGTCATGGTTATGGGGATACATGCACATTTTTAGTTGAAGGC
ATAGCAAGGAAATTAGCATCTTTTGGTTATGGAGTAGTCGCGATGGATTACCCTGGATTT
GGTCTTTCAGAAGGTCTTCATGGCTATATCCCAAGTTTTGACAAGCTGGTCGATGATGTT
ATTGAGCATTATTCGAAAGTTAAAGAAAAGCTGGAGTTACATGATCTACCAAGCTTCCTA
TTTGGGGAATCCATGGGTGGAGCTATAGCTTTGAAAGTGCACCAGAACCACCCTACTGCT
TGGAATGGTGCTGTTCTTGTGGCACCTATGTGCAAAATTGCAGATAACATGGTTCCACCA
TGGTTAGTAACACAAATTTTAATTGGCGTCGCAAAGTTCCTCCCAACACAGAAGCTAGTT
CCGACGCAGGACTTGGGAGAATTGGCAGTCAGAGATGCAAAGAAGAAAGAACTGACTGCC
TATAATATCATCTCTTACAAACATAAACCCCGTATACGGACCGCCCTGGAGTTACTGAAT
GCCACCCAAGAGATAGAGAGACTACTGGAAAAGGTCTCTCTGCCATTGTTAATCTTGCAC
GGAAAGAATGATATGGTGACAGATCCATCGGTTAGCAAAGCACTGTATGAGAGGGCAAGT
AGTTCGGACAAGAAACTGATCCTTTATGAGGATGCTTATCATGCCTTGCTTGAGGGTGAA
CCGGATGAAATGATACTTCGAGTTTTTGGTGACATTATTTCATGGCTGAATGAGCATACC
ATCTCCTAG

Peptide Sequence

PEP ID

XP_016456598.1
PEP Infomation

PREDICTED: caffeoylshikimate esterase-like [Nicotiana tabacum]
Sequence

MGNQKKFPGISEELQKILDADMDNVDARRRAREAFKDIQLSIDHILFKVPHAGLKMEESY
DVNSGGLEIFSKSWLPETRPKAVVYFCHGYGDTCTFLVEGIARKLASFGYGVVAMDYPGF
GLSEGLHGYIPSFDKLVDDVIEHYSKVKEKLELHDLPSFLFGESMGGAIALKVHQNHPTA
WNGAVLVAPMCKIADNMVPPWLVTQILIGVAKFLPTQKLVPTQDLGELAVRDAKKKELTA
YNIISYKHKPRIRTALELLNATQEIERLLEKVSLPLLILHGKNDMVTDPSVSKALYERAS
SSDKKLILYEDAYHALLEGEPDEMILRVFGDIISWLNEHTIS

Transcript Sequence

Gene sequence data has not been registered.